Agent Skills Index

Directory / Scientific Agent Skills (K-Dense) / tamarind

tamarind

skill Science, research & learning

Provides access to a collection of open-source molecular design and structural biology tools on the Tamarind Bio platform, via its REST API or MCP server — no local GPUs required. Tamarind bundles popular open-source models for structure prediction (AlphaFold, Boltz, Chai, ESMFold), protein, binder, and de novo design (RFdiffusion, ProteinMPNN, BoltzGen), antibody and nanobody design and developability, protein-ligand docking (DiffDock, Autodock Vina), binding-affinity prediction, MSA generation, and molecular dynamics. Use when the user mentions Tamarind or tamarind.bio, wants to run any of these open-source tools in the cloud, references app.tamarind.bio/api or the x-api-key header, or needs to submit batches of sequences for structural or biophysical characterization.
Description from the SKILL.md front matter.

Information source

Copied from the Scientific Agent Skills (K-Dense) catalog (K-Dense-AI/scientific-agent-skills), maintained by K-Dense Inc..

Links are pinned to commit 593377b (2026-10-19), the version we synced. Not reviewed by us.

Install

GitHub CLI v2.90+ (Copilot by default)
gh skill install K-Dense-AI/scientific-agent-skills tamarind
For Claude Code
gh skill install K-Dense-AI/scientific-agent-skills tamarind --agent claude-code
For Codex
gh skill install K-Dense-AI/scientific-agent-skills tamarind --agent codex

Commands follow each host's documentation (Any Agent Skills host (Claude Code, Codex, Cursor, Gemini CLI, Copilot…) docs). gh skill needs GitHub CLI 2.90 or later and is in public preview.

Listed from K-Dense Inc.'s catalog, not reviewed by us. Read the source before installing.

Catalog
Scientific Agent Skills (K-Dense)
Information source
SKILL.md in K-Dense-AI/scientific-agent-skills
Author
Tamarind Bio
Source code
K-Dense-AI/scientific-agent-skills
License
MIT
Repository stars
52,882 for K-Dense-AI/scientific-agent-skills (the whole catalog repo)
Version
1.3
Added to catalog
Not tracked for this source
Last change
2026-10-19 (last push to the repo)

What it contains

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